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2012-12-18

Extracellular vesicles (EVs) are a class of membranous vesicles that are released by multiple cell types into the extracellular environment. This unique class of extracellular organelles which play pivotal role in intercellular communication are conserved across prokaryotes and eukaryotes. VesiclepediaVesiclepedia (http://www.microvesicles. org) is a manually curated compendium that contains molecular data identified in all classes of EVs, including AB, exosomes, large dense core vesicles, microparticles, and shedding microvesicles. Extracellular vesicles (EVs) are membraneous vesicles released by a variety of cells into their microenvironment. Recent studies have elucidated the role of EVs in intercellular communication, pathogenesis, drug, vaccine and gene-vector delivery, and as possible reservoirs of biomarkers.

Vesiclepedia

Vesiclepedia [Elektronisk resurs] a compendium for extracellular vesicles with continuous community annotation Kalra, Hina (författare) Simpson, Richard J (författare) Ji, Hong (författare) Aikawa, Elena (författare) Altevogt, Peter (författare) Askenase, Philip (författare) Bond, Vincent C (författare) Borràs, Francesc E (författare) Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Researchers at La Trobe University have created Vesiclepedia, a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries. Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Vesiclepedia is publicly available and allows users to query and download EV cargo based on different search criteria. The mode of EV isolation and characterization, the biophysical and molecular properties and EV-METRIC are listed in the database aiding biomedical scientists in assessing the quality of the EV preparation and the corresponding data obtained.

Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent stud-ies published over the past several years. Even though databases are indispensable resources for the scientific community, recent stud-ies have shown that more than 50% of the

Recent studies have ignited significant interest on EVs by elucidating their role in intercellular communication, Vesiclepedia (http://www.microvesicles.org) is a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries. Vesiclepedia (http://www.microvesicles.org) is a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries.

Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation. H Kalra, RJ Simpson, H Ji, E Aikawa, P Altevogt, P Askenase, VC

Vesiclepedia is a a manually curated compendium of molecular data (lipid, RNA and protein) identified in different classes of EVs. Kalra et al. Focus on Extracellular … Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. 2012-12-18 Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years. Even though databases are indispensable resources for the scientific community, Researchers at La Trobe University have created Vesiclepedia, a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries.

DSpace/Manakin Repository 2012-12-18 Hina Kalra, Richard J. Simpson, Hong Ji, Elena Aikawa, Peter Altevogt, Philip Askenase, Vincent C. Bond, Francesc E. Borràs, Xandra Breakefield, Vivian Budnik, Edit 1 EV studies 1254 2 RNA entries 38 146 3 mRNA entries 27 646 4 Unique mRNA 17 005 5 miRNA entries 10 520 6 Unique miRNA 2431 Update Vesiclepedia data automatically: 10: Completed: 21: Mapping and conversion of acession IDs to different databases: 10: Completed: 22: Venn diagram of the Vesiclepedia would benefit from displaying distribution of the sample genes by EV subtypes: 9: Completed: 23: Description of the Vesiclepedia section in the manual: 8: Completed: 24 www.ncbi.nlm.nih.gov Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than 300 independent studies published over the past several years.
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Based on their diameter, EVs can be Here, we describe Vesiclepedia, a manually curated compendium of molecular data (lipid, RNA, and protein) identified in different classes of EVs from more than Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation. Artikel i vetenskaplig tidskrift, refereegranskad. Författare. Extending gene ontology in the context of extracellular RNA and vesicle communication · K. H. Cheung | · S. Keerthikumar | · P. Roncaglia | · S. L. Subramanian | Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation. H Kalra, RJ Simpson, H Ji, E Aikawa, P Altevogt, P Askenase, VC av D RIBEIRO · 2018 — Mathivanan, Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation, PLoS Biol 10(12) (2012) e1001450.

Novel devices for isolation and detection of bacterial and mammalian extracellular vesicles.
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Currently, Vesiclepedia comprises 35,264 protein, 18,718 mRNA, 1,772 miRNA and 342 lipid entries encompassed from 341 independent studies that were published over the past several years. Even though databases are indispensable resources for the scientific community, recent studies have shown that more than 50% of the databases are not updated for a long time.

Vesiclepedia (http://www.microvesicles.org) is a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries.

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(2016), as well as the recently established Exosome Protein, RNA and Lipid Database 'ExoCarta' (http://www.exocarta.org) and Vesiclepedia, a compendium of

Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation. Hina Kalra, Richard J Simpson, Hong Ji, Elena Aikawa, Peter Altevogt, www.ncbi.nlm.nih.gov 2020-12-11 · Vesiclepedia 2019: a compendium of RNA, proteins, lipids and metabolites in extracellular vesicles Nucleic Acids Res. , 47 ( 2019 ) , pp. D516 - D519 CrossRef View Record in Scopus Google Scholar Vesiclepedia 2019: A compendium of RNA, proteins, lipids and metabolites in extracellular vesicles Mitt namn är Hadi Valadi och jag är molekylärbiolog. År 2003 disputerade jag i Kemi & molekylärbioteknik vid Chalmers tekniska högskola, Avd. för Molekylär Bioteknik, under ledning av professor Lena Gustanfsson. Under denna period studerade jag funktionella analysen av tre iso-enzymer (Glyceraldehyde 3-phosphate dehydrogenase) som tillhör övre delen av glykolysen. Mellan 2004 och Use Case 2 Part 2: The exRNA Atlas, DEseq and exceRpt pipelines, Vesiclepedia, and Pathway Analysis (pdf, data, article) Use Case 3: Biomarker Potential and Limitations of Circulating miRNA (pdf, pptx, data, article) Currently, Vesiclepedia comprises 35,264 protein, 18,718 mRNA, 1,772 miRNA and 342 lipid entries encompassed from 341 independent studies that were published over the past several years. Even though databases are indispensable resources for the scientific community, recent studies have shown that more than 50% of the databases are not updated for a long time.